Add mapping: 100302 by osaeedi · Pull Request #27 · opendatabs/ogd-to-lod

osaeedi · 2026-05-28T21:22:16Z

RML Mapping: Abwassermonitoring: Influenza und RSV

Der Datensatz zeigt den 7-Tage-Median der RNA-Kopien des angegebenen Virus jeweils pro Tag und 100‘000 Personen im Abwasser der Abwasserreinigungs-Anlage (ARA) Basel sowie den 7-Tage-Median der entspr...

Source Information

CSV Source: (not provided)
Context/Metadata Files: dcat.ttl, fields.json
Base URI: https://ld.bs.ch/

Mapping Structure

The dimensions are: datum (temporal, day), kw (categorical, week), spatial_coverage (spatial, from context), and sample_ba_nr (categorical, sample identifier), as they uniquely identify each observation.
All other columns were mapped as measures, including all virus genome count variants and case numbers, to capture the core observed values for each sample/date/week.
No columns were dropped; every CSV field was included as a dimension or measure.
Where 7-day median values are present (columns ending in _7_d_median or 7t_median_*), these were retained as specific median aggregations but not modeled as explicit hierarchies.
Code value resources were generated for week and sample dimensions to support categorical lookups/labels per cube.link conventions.

Dimensions:

datum (temporal) - granularity: day
kw (categorical) - granularity: week
spatial_coverage (spatial)
sample_ba_nr (categorical)

Measures:

infa_gc_pcr (Genomkopien pro PCR-Probe)
infb_gc_pcr (Genomkopien pro PCR-Probe)
rsv_gc_pcr (Genomkopien pro PCR-Probe)
infa_gc_l (Genomkopien pro Liter)
infb_gc_l (Genomkopien pro Liter)
rsv_gc_l (Genomkopien pro Liter)
infa_gc_l_7_d_median (Genomkopien pro Liter (7-Tage-Median)) - aggregation: median
infb_gc_l_7_d_median (Genomkopien pro Liter (7-Tage-Median)) - aggregation: median
rsv_gc_l_7_d_median (Genomkopien pro Liter (7-Tage-Median)) - aggregation: median
infa_gc_100_000_p (Genomkopien pro 100.000 Personen)
infb_gc_100_000_p (Genomkopien pro 100.000 Personen)
rsv_gc_100_000_p (Genomkopien pro 100.000 Personen)
infa_gc_100_000_p_7_d_median (Genomkopien pro 100.000 Personen (7-Tage-Median)) - aggregation: median
infb_gc_100_000_p_7_d_median (Genomkopien pro 100.000 Personen (7-Tage-Median)) - aggregation: median
rsv_gc_100_000_p_7_d_median (Genomkopien pro 100.000 Personen (7-Tage-Median)) - aggregation: median
infa_gc_pmmov (Genomkopien PMMoV-standardisiert)
infb_gc_pmmov (Genomkopien PMMoV-standardisiert)
rsv_gc_pmmov (Genomkopien PMMoV-standardisiert)
infa_gc_pmmov_7_d_median (Genomkopien PMMoV-standardisiert (7-Tage-Median)) - aggregation: median
infb_gc_pmmov_7_d_median (Genomkopien PMMoV-standardisiert (7-Tage-Median)) - aggregation: median
rsv_gc_pmmov_7_d_median (Genomkopien PMMoV-standardisiert (7-Tage-Median)) - aggregation: median
anz_pos_a_bs (Meldepflichtig positive Influenza-A-Fälle Basel-Stadt)
anz_pos_a_h1_bs (Meldepflichtig positive Influenza-A(H1) Fälle Basel-Stadt)
anz_pos_a_h1n1_bs (Meldepflichtig positive Influenza-A(H1N1) Fälle Basel-Stadt)
anz_pos_a_h3_bs (Meldepflichtig positive Influenza-A(H3) Fälle Basel-Stadt)
anz_pos_b_bs (Meldepflichtig positive Influenza-B-Fälle Basel-Stadt)
anz_pos_a_bl (Meldepflichtig positive Influenza-A-Fälle Baselland)
anz_pos_b_bl (Meldepflichtig positive Influenza-B-Fälle Baselland)
anz_pos_all_bl (Meldepflichtig positive Influenza-Fälle gesamt Baselland)
infa_bs_bl (Influenza-A-Fälle gesamt BL)
infb_bs_bl (Influenza-B-Fälle gesamt BL)
7t_median_infa (7-Tage-Median Influenza-A) - aggregation: median
7t_median_infb (7-Tage-Median Influenza-B) - aggregation: median
kw_anz_pos_rsv_usb (Meldepflichtig positive RSV-Fälle im Unispital Basel, Wochenwert)

CSV Preview

datum	sample_ba_nr	infa_gc_pcr	infb_gc_pcr	rsv_gc_pcr	infa_gc_l	infb_gc_l	rsv_gc_l	infa_gc_l_7_d_median	infb_gc_l_7_d_median	rsv_gc_l_7_d_median	infa_gc_100_000_p	infb_gc_100_000_p	rsv_gc_100_000_p	infa_gc_100_000_p_7_d_median	infb_gc_100_000_p_7_d_median	rsv_gc_100_000_p_7_d_median	infa_gc_pmmov	infb_gc_pmmov	rsv_gc_pmmov	infa_gc_pmmov_7_d_median	infb_gc_pmmov_7_d_median	rsv_gc_pmmov_7_d_median	anz_pos_a_bs	anz_pos_a_h1_bs	anz_pos_a_h1n1_bs	anz_pos_a_h3_bs	anz_pos_b_bs	anz_pos_a_bl	anz_pos_b_bl	anz_pos_all_bl	infa_bs_bl	infb_bs_bl	7t_median_infa	7t_median_infb	kw	kw_anz_pos_rsv_usb
2024-05-19	Ba240059	None	None	12.4	0.0	0.0	4960.0	0.0	0.0	4960.0	0.0	0.0	109493682064.43488	0.0	0.0	159723039827.375	0.0	0.0	9.059360730593607e-05	0.0	0.0	9.059360730593607e-05	None	None	None	None	None	1	0	1	1	0	1	0	20	1
2024-05-25	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1	0	21	0
2024-06-03	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	23	2
2024-06-04	None	None	None	None	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	-100000000000.0	-100000000000.0	-100000000000.0	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	None	None	None	None	None	None	None	None	None	23	2
2024-06-07	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	23	2
2024-06-10	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	24	0
2024-06-19	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	25	1
2024-07-01	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	27	0
2024-07-03	None	None	None	None	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	-100000000000.0	-100000000000.0	-100000000000.0	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	None	None	None	None	None	None	None	None	None	27	0
2024-07-05	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1	0	27	0
2024-07-08	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1	0	28	1
2024-07-09	None	None	None	None	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	-100000000000.0	-100000000000.0	-100000000000.0	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	None	None	None	None	None	None	None	1	0	28	1
2024-07-16	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	29	1
2024-07-18	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	29	1
2024-07-21	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	29	1
2024-07-25	None	None	None	None	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	-100000000000.0	-100000000000.0	-100000000000.0	None	None	None	-10000.0	-10000.0	-10000.0	None	None	None	None	None	0	1	1	0	1	0	0	30	0
2024-07-28	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0	0	30	0
2024-07-29	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1	0	1	1	0	0	0	31	0
2024-08-01	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1	0	31	0
2024-08-03	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1	0	31	0

RDF Preview

@prefix : <http://mapping.example.com/> .
@prefix csvw: <http://www.w3.org/ns/csvw#> .
@prefix cube: <https://cube.link/> .
@prefix d2rq: <http://www.wiwiss.fu-berlin.de/suhl/bizer/D2RQ/0.1#> .
@prefix dc: <http://purl.org/dc/terms/> .
@prefix ex: <https://ld.bs.ch/100302/> .
@prefix ex-code: <https://ld.bs.ch/code/> .
@prefix ex-obs: <https://ld.bs.ch/100302/observation/> .
@prefix ex-property: <https://ld.bs.ch/property/> .
@prefix fnml: <http://semweb.mmlab.be/ns/fnml#> .
@prefix fno: <https://w3id.org/function/ontology#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rml: <http://w3id.org/rml/> .
@prefix schema: <http://schema.org/> .
@prefix void: <http://rdfs.org/ns/void#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

ex:observation-set cube:observation ex-obs:2024-05-19_20_Ba240059 .

ex-obs:2024-05-19_20_Ba240059 a cube:Observation;
  ex-property:7t_median_infa 1;
  ex-property:7t_median_infb 0;
  ex-property:KW 20;
  ex-property:RAUM ex-code:Basel-ARA;
  ex-property:SAMPLE_BA_NR "Ba240059";
  ex-property:ZEIT "2024-05-19"^^xsd:date;
  ex-property:anz_pos_a_bl 1;
  ex-property:anz_pos_all_bl 1;
  ex-property:anz_pos_b_bl 0;
  ex-property:infa_bs_bl 1;
  ex-property:infa_gc_100_000_p 0.0;
  ex-property:infa_gc_100_000_p_7_d_median 0.0;
  ex-property:infa_gc_l 0.0;
  ex-property:infa_gc_l_7_d_median 0.0;
  ex-property:infa_gc_pmmov 0.0;
  ex-property:infa_gc_pmmov_7_d_median 0.0;
  ex-property:infb_bs_bl 0;
  ex-property:infb_gc_100_000_p 0.0;
  ex-property:infb_gc_100_000_p_7_d_median 0.0;
  ex-property:infb_gc_l 0.0;
  ex-property:infb_gc_l_7_d_median 0.0;
  ex-property:infb_gc_pmmov 0.0;
  ex-property:infb_gc_pmmov_7_d_median 0.0;
  ex-property:kw_anz_pos_rsv_usb 1;
  ex-property:rsv_gc_100_000_p 109493682064.43488;
  ex-property:rsv_gc_100_000_p_7_d_median 159723039827.375;
  ex-property:rsv_gc_l 4960.0;
  ex-property:rsv_gc_
... (truncated)

Generated by OGD to LOD

osaeedi added 3 commits May 28, 2026 23:22

Add YARRRML mapping: 100302

0568da7

Add CSV source: data.csv

7ae735b

Add static metadata: 100302

89d04d3

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Add mapping: 100302#27

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osaeedi commented May 28, 2026

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osaeedi commented May 28, 2026

RML Mapping: Abwassermonitoring: Influenza und RSV

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Mapping Structure

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