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Pull requests: smith-chem-wisc/mzLib

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Pull requests list

Add isotopically-unresolved (average-mass) envelope support
#1081 opened Jun 29, 2026 by trishorts Contributor • Draft
1
Cover all three generated mzIdentML DTO versions via reflection Maintenance The user isn't impacted by it, it's purely behind the scenes ready for review
#1080 opened Jun 29, 2026 by trishorts Contributor Loading…
1
Expose the most-abundant observed mass on IsotopicEnvelope (resolved) enhancement
#1078 opened Jun 16, 2026 by trishorts Contributor Loading…
17
Add MslDbBuilder: FASTA→.msl spectral-library builder for ManySearchTask
#1076 opened Jun 15, 2026 by trishorts Contributor Loading…
1
Adding remaining Koina models enhancement ready for review
#1073 opened May 25, 2026 by pcruzparri Contributor Loading…
22
feat: ProForma 2.0 reader/writer and Layer-2 modification converter
#1072 opened May 24, 2026 by trishorts Contributor Loading…
2
Move MS:1000516 ChargeArray onto MzSpectrum where the peaks live (supersedes #1062)
#1063 opened May 12, 2026 by pcarvalho75 Contributor Loading…
2
support UNIMOD format parsing and centralized mod-dictionary projection enhancement ready for review Refactor
#1050 opened Apr 16, 2026 by nbollis Member Loading…
10
Real OpenMS FLASHDeconv using exe from provided installation path New Feature ready for review
#1045 opened Apr 9, 2026 by trishorts Contributor Loading…
18
Fd
#1042 opened Apr 8, 2026 by trishorts Contributor Loading…
1
Readers: FDRBench files New Feature
#1039 opened Mar 26, 2026 by nbollis Member Loading…
1
Professor lupin
#1038 opened Mar 25, 2026 by trishorts Contributor Loading…
8
Dia
#1027 opened Feb 25, 2026 by trishorts Contributor Loading…
1
Intenenal ions squared
#1022 opened Feb 20, 2026 by trishorts Contributor Loading…
1
Simple quant writer2 WIP
#1001 opened Dec 18, 2025 by trishorts Contributor Loading…
1
Quant Project (WIP)
#1000 opened Dec 18, 2025 by Alexander-Sol Contributor Loading…
4
Isobaric Quant FileInfo and PlexAnnotation to achieve something analogous to SpectraFileInfo WIP
#990 opened Dec 5, 2025 by trishorts Contributor Loading…
15
Add interface IHasIsobaricQuantReporters so that SpectralMatch can optionally have reporter ion intensities WIP
#989 opened Dec 4, 2025 by trishorts Contributor Loading…
4
Quant interfaces
#985 opened Dec 3, 2025 by Alexander-Sol Contributor Loading…
5
isobaric quant engine and results
#984 opened Dec 1, 2025 by trishorts Contributor Loading…
1
Proposed Organization and Place for AI and Heuristic Predictions of BioPolymer properties New Feature
#982 opened Nov 21, 2025 by trishorts Contributor Loading…
3
Running round in circles
#980 opened Nov 13, 2025 by trishorts Contributor Loading…
Handling of applied variants with and without modifications Breaks Integration Tests ready for review
#974 opened Oct 27, 2025 by trishorts Contributor Loading…
6
One variant application to rule them all
#973 opened Oct 27, 2025 by trishorts Contributor Loading…
Update Handling of Sequence Variants (Part 8): Point LoadRnaXML to new VariantApplicationMethod ready for review
#972 opened Oct 26, 2025 by trishorts Contributor Loading…
1
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