Skip to content

Add CryoET Data Portal entry#334

Merged
joshmoore merged 1 commit into
ome:mainfrom
lubianat:patch-1
Sep 22, 2025
Merged

Add CryoET Data Portal entry#334
joshmoore merged 1 commit into
ome:mainfrom
lubianat:patch-1

Conversation

@lubianat

Copy link
Copy Markdown
Contributor

The CryoET Data Portal has many Zarr v2 datasets, and includes Zarr in their pipeline.

Overview of the data at this sandbox:

http://tiago.bio.br/ome2024-ngff-challenge/?csv=https://raw.githubusercontent.com/lubianat/ome2024-ngff-challenge/refs/heads/sandbox/samples/cryoet_manifest.csv

I have added a discussion at the CryoET GitHub forum about v3, as they seem quite active: chanzuckerberg/cryoet-data-portal#1966

The CryoET Data Portal has many Zarr v2 datasets, and includes Zarr in their pipeline. 

Overview of the data at this sandbox:

http://tiago.bio.br/ome2024-ngff-challenge/?csv=https://raw.githubusercontent.com/lubianat/ome2024-ngff-challenge/refs/heads/sandbox/samples/cryoet_manifest.csv
@github-actions

Copy link
Copy Markdown
Contributor

Automated Review URLs

@joshmoore

Copy link
Copy Markdown
Member

Thanks, @lubianat! (Reminder for myself: moving forward, we might want to keep track of which versions are used.)

@joshmoore joshmoore merged commit 4f11d89 into ome:main Sep 22, 2025
2 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants