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fethalen/README.md

Hi! I'm Felicia. 👋

I'm a research software engineer at ETH Zurich, where I develop reproducible workflows for metagenomic datasets.

I hold a doctorate in Genome Science from the University of Göttingen.

My thesis focused on the use of genome skimming for phylogenomics. As part of this work, I developed Patchwork, a tool for extracting phylogenetic markers from genomic data, and used it to reconstruct the largest phylogeny of the annelid family Nereididae based on molecular data.

My background spans animal evolution and cardiovascular disease, and I currently work in microbiome research.

Popular repositories Loading

  1. Patchwork Patchwork Public

    Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data

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    Tree-based orthology inference with functionality for reducing contamination

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    A Grep-like tool for retrieving matching sequence records from a FASTA file.

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    A stand-alone tool for evaluating simple statistics of orthologs

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  5. Papaya Papaya Public

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  6. fethalen fethalen Public

    About me