V1.0

Stable release for chromosome-level scaffolding using Hi-C data.

Key Features:
✅ End-to-end workflow: Aligns Hi-C reads (), scaffolds contigs (), and prepares files for visualization.
✅ User-friendly: Supports -profile conda for automatic dependency management.
✅ Cluster-ready: Pre-configured for UOH cluster (-profile uoh).
✅ Reproducible: Nextflow-based with version-controlled dependencies.
✅ Containers: singularity container available for most process