These scripts were used for processing data in the manuscript: "The Microbial Ecosystem of Beer Spoilage and Souring: Competition and Cooperation in the Age of Bioinformatics"
The complete thesis is available for download here: https://stars.library.ucf.edu/cgi/viewcontent.cgi?article=7035&context=etd
pairwise_paths* Pathway relatedness or competition
pairwise_prot* Proteome relatedness or competition
pairwise_seeds* Seed relatedness or competition
ubique* Determine ubiquity/uniqueness of pathways
data_proc* Process spectrophotometer reads into neat Pandas tables
make_graphs* Produce graphs from neat Pandas tables
The LICENCE information is applicable to all projects and files within this repository https://github.com/akettring/biomatics