Region Embeddings#46

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bramstuyven wants to merge 8 commits into

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region_embeddings

Commits on Apr 17, 2026

Add VAE-based dimensionality reduction to cluster_seqlets
dabaffy
committed

Commits on Apr 21, 2026

Implemented mean region embedding
Bram Stuyven
committed
ignore notebook checkpoints
Bram Stuyven
committed

Commits on Apr 22, 2026

backwards compatible + embedding tsne
Bram Stuyven
committed
refining tsne code
Bram Stuyven
committed

Commits on Apr 27, 2026

TSNE cleaned
Bram Stuyven
committed

Commits on Apr 28, 2026

Implemented count embeddings + more tsne cleanup
Bram Stuyven
committed
save weighted embeddings seperatly
Bram Stuyven
committed