v0.0.14

This release adds several fixes and improvements for the coregistration module, in particular for point data and pipelines.

It also significantly improves the environment management, to ensure it is more robust to updates and consistent between pip and conda (the latest remaining the recommended channel for installation).

What's Changed

• Update typing with GeoUtils 0.0.13 by @rhugonnet in #400
• Update README.md to point to xdem instead of geoutils by @erikmannerfelt in #412
• Update CI action versions. by @erikmannerfelt in #411
• Multiple coreg fit_pts fixes. by @erikmannerfelt in #407
• Fix dDEM.nodata setting on instantiation by @rhugonnet in #418
• Make environment files management consistent between pip and conda by @rhugonnet in #429
• Fix CoregPipeline to work with biascorr methods by @rhugonnet in #424
• Minor a posteriori fixes on recent PRs by @rhugonnet in #433
• Update contributing guidelines to be more accessible by @rhugonnet in #432
• Declare xdem.coreg module explicitly for conda-forge by @rhugonnet in #438
• Improve subsample across Coreg subclasses and pipelines by @rhugonnet in #436

Full Changelog: v0.0.13...v0.0.14

v0.0.13

No new functionality, simply making PyPI and Conda versions fully consistent and functional by fixing a circular import error that happened only in conda-forge build.

Note: re-release due to accidentally publishing the pre-release 0.0.12 on PyPI.

What's Changed

• Silence numba warning for @jit by @rhugonnet in #395
• Make noisyopt an optional dependency by @rhugonnet in #397
• Only use conda-forge channel in environment by @rhugonnet in #398

Full Changelog: v0.0.11...v0.0.13

v0.0.12pre

Pre-releasing to solve a mysterious build error in conda-forge, with some optional dependency changes and fix for warning issues on import.

Note: Accidentally released on PyPI, will bump to 0.0.13 for consistency between PyPI and conda-forge.

What's Changed

• Silence numba warning for @jit by @rhugonnet in #395
• Make noisyopt an optional dependency by @rhugonnet in #397
• Only use conda-forge channel in environment by @rhugonnet in #398

Full Changelog: v0.0.11...v0.0.12pre

v0.0.11

This release primarily re-structures coregistration classes, adds bias correction classes and a new co-registration method.
More improvements to come soon on coregistration classes and pipelines.

This release also fixes some behaviour for uncertainty analysis.

What's Changed

• Gradient descending coreg by @liuh886 in #346
• Remove old notebooks by @rhugonnet in #386
• Report MySt-NB failures as error in Sphinx build by @rhugonnet in #388
• Add BiasCorr classes and rename previous coreg.BiasCorr in coreg.VerticalShift by @rhugonnet in #158
• Extrapolate using nearest neighbour in interp_nd_binning by @rhugonnet in #389
• Use NMAD consistently in examples and clarify link to Dowd's variogram in doc by @rhugonnet in #390

Full Changelog: v0.0.10...v0.0.11

v0.0.10

Vertical CRS transformations now integrated!

What's Changed

• Rework DEM.vcrs to support any 3D transformation (and fix with PROJ update) by @rhugonnet in #350
• Fix nodata not preserved when calculating terrain attributes with richdem by @adehecq in #372
• Fix richdem build issue and new warning in terrain.py by @rhugonnet in #375

Full Changelog: v0.0.9...v0.0.10

v0.0.9

Minor fixes to documentation, and a release so that the new Readthedocs default branch stable displays things nicely.

What's Changed

• Fix typo in .readthedocs.yaml by @rhugonnet in #368
• Fix package name in xdem.__init__ by @rhugonnet in #369

Full Changelog: v0.0.8...v0.0.9

v0.0.8

Summary

This release follows a relook of the documentation of xDEM (+ new interactive features), mirroring changes in the brand new documentation of GeoUtils 🥳.

It also updates xDEM's behaviour with GeoUtils 0.0.11 for more implicit loading, casting of Raster.data to 2D, and the addition of the Mask class. See details on big changes here: https://github.com/GlacioHack/geoutils/releases/tag/v0.0.11.

The coreg.py module has also been streamlined (but this might only be the beginning!).

Additionally, the continuous-integration and tests have been improved.

What's Changed

• Fix bugs following geoutils update by @adehecq in #291
• Add HOW_TO_RELEASE file by @rhugonnet in #290
• Shorten tests and vectorize patches_method by @rhugonnet in #292
• Fix tests with GeoUtils data.setter and __array_interface__ update by @rhugonnet in #301
• Add pre-commit to CI and fix all typing and linting by @rhugonnet in #306
• Check base environment in CI and test .yml files in test_misc.py by @rhugonnet in #305
• Fix version check in misc.test_deprecate by @rhugonnet in #307
• Fix deprecate version check by @rhugonnet in #309
• Add Mac and Windows to CI by @rhugonnet in #304
• Unforce openh264 version by @rhugonnet in #321
• Add caching to CI environment setup by @rhugonnet in #320
• Make opencv import optional by @adehecq in #319
• Make xdem compatible for Binder by @adehecq in #312
• Implement one-liner coregistration by @adehecq in #267
• Get consistent scipy.optimize outputs out of NuthKaab by @rhugonnet in #322
• Fix loading of processed examples in examples.py by @rhugonnet in #328
• Fix flake8 hook address in pre-commit by @rhugonnet in #332
• Re-organize coreg.py by @adehecq in #329
• Fix xDEM with GeoUtils v0.0.10 by @rhugonnet in #336
• Fix typo by @alessandro-gentilini in #333
• Edit bands into indexes of DEM class by @liuh886 in #340
• Update with new GeoUtils (casting single-band to 2D, implicit loading, new module names) by @rhugonnet in #341
• Move documentation to sphinx-book-theme and myst by @rhugonnet in #303
• Remove local table of contents in documentation by @rhugonnet in #351
• Linting of #351 by @rhugonnet in #352
• Fix GitHub Actions mamba caching by @erikmannerfelt in #354
• Add coveragerc to ignore specific lines when estimating test coverage by @rhugonnet in #357
• Remove spatialstats test based on time that randomly fails by @rhugonnet in #355
• Enable building the doc in offline formats by @adehecq in #363
• Fix inheritance diagram rendering in documentation by @rhugonnet in #364
• Add dark-theme logo and favicon for documentation by @rhugonnet in #365
• Force to geoutils=0.0.11 for release 0.0.8 by @rhugonnet in #367

New Contributors

• @alessandro-gentilini made their first contribution in #333
• @liuh886 made their first contribution in #340

Full Changelog: v0.0.7...v0.0.8

v0.0.7

What's Changed

Advances in spatialstats.py for ease of use, testing and documentation.
Moved to Python 3.10 (3.7 removed) in CI and added test coverage stats uploaded to Coveralls.

• Homogenize and simplify spatialstats.py by @rhugonnet in #276
• Update explicit dependencies with discrepancies found by conda-forge bot by @rhugonnet in #278
• Move to python 3.10 in CI and remove python 3.7 by @rhugonnet in #279
• Fix previously skipped tests that used to fail randomly by @rhugonnet in #280
• Add test coverage from Coveralls in CI by @rhugonnet in #281
• Add error pipeline and adapt documentation by @rhugonnet in #283
• Split sphinx gallery into two subsections by @rhugonnet in #287
• Force geoutils to 0.0.8 by @rhugonnet in #288

Full Changelog: v0.0.6...v0.0.7

v0.0.6

New release to add improvements of the last year: notably bug fixes, additions in terrain.py, spatialstats.py, improvement of NaN behaviour in Coreg methods, updates due to changes in https://github.com/GlacioHack/GeoUtils/ and restructuration of the documentation.
This release also matches the environment used in Hugonnet et al. (2022), Uncertainty analysis of digital elevation models by spatial inference from stable terrain (see https://github.com/rhugonnet/dem_error_study).

What's Changed

• Fix Deramp by @rhugonnet in #202
• Update skgstat version to latest fixes by @rhugonnet in #207
• Add robust polynomial, sum of sinusoids fitting by @rhugonnet in #151
• Fix build failure by @rhugonnet in #210
• Re-enable blockwise test by @erikmannerfelt in #214
• Minor fix in interp_nd_binning by @rhugonnet in #219
• Add more options to spatialstats functions by @rhugonnet in #218
• Fix plot variogram by @rhugonnet in #220
• Fix bug and streamline in DEM.to_vref/set_vref, related tests, change ccrs into a property by @rhugonnet in #222
• Add scaling factor details to nmad function description by @rhugonnet in #221
• Remove spatial tools by @atedstone in #228
• Fix nan skipping in patches method by @rhugonnet in #229
• Fix NaNs in "longyearbyen_ddem" example by @rhugonnet in #224
• Fixes bugs in spatialstats by @rhugonnet in #230
• Improve coreg methods with NaNs by @adehecq in #236
• Fix DEM.copy with new_array argument by @rhugonnet in #240
• Fix issue with NaNs masks in Coreg methods by @adehecq in #242
• Fix get_terrain_attribute bug with edge_method='none' by @rhugonnet in #245
• Fix issue in volume.calculate_hypsometry_area when ddem_bins contain NaNs by @adehecq in #248
• Add terrain attributes (TRI, TPI, Roughness, Rugosity), add methods of slope, aspect, hillshade and test robustness against GDAL and richDEM by @rhugonnet in #227
• Restructure documentation and add or streamline beginner-friendly examples by @rhugonnet in #265
• Update spatialstats.py plot functions to work with provided ax by @adehecq in #269
• Add gaussian and exponential models to fit_sum_model_variogram by @rhugonnet in #271

New Contributors

• @atedstone made their first contribution in #228

Full Changelog: v0.0.5...v0.0.6

v0.0.5

Changelog

• Renamed and revised xdem.spstats -> xdem.spatialstats
• Added normalized hypsometric interpolation functions
• Added N-dimensional binning function (for biases, non-stationarity quantification etc..
• Added subsampling function
• Added blockwise coregistration class.
• Added N-dimensional linear interpolation functions.
• Improved Raster/ndarray interchangeability
• Performance enhancements.
• Lots of bugfixes.