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Check if path given to --workflow-profile is a directory

Status: Open.

#5209 In Clinical-Genomics/cg;

· karlnyr opened on Jul 17, 2026

Bug: Unable to use provided panel when starting using the --panel-bed option

Bug

Status: Open.

#5208 In Clinical-Genomics/cg;

· karlnyr opened on Jul 16, 2026

Upload rank model files to Scout from HK bundles for raredisease and scout

Status: Open.

#5206 In Clinical-Genomics/cg;

· diitaz93 opened on Jul 15, 2026

Save rank variant model files in case directory upon configuring rd and Nallo cases

Status: Open.

#5204 In Clinical-Genomics/cg;

· diitaz93 opened on Jul 15, 2026

Automatic deliveries are not working for pools

Status: Open.

#5200 In Clinical-Genomics/cg;

· Vince-janv opened on Jul 14, 2026

Fix scaling of compress FASTQ command

Status: Open.

#5199 In Clinical-Genomics/cg;

· Vince-janv opened on Jul 14, 2026

Bug: Balsamic research SNV not delivered to Caesar

Bug

Status: Open.

#5198 In Clinical-Genomics/cg;

· mathiasbio opened on Jul 13, 2026

Scout upload of tomte case to multiple DNA cases has inconsistent terminating/non-terminating error handling in subcommands

Status: Open.

#5195 In Clinical-Genomics/cg;

· kedhammar opened on Jul 9, 2026

Add proper end to delivery messages + edit the message for microSALT cases

Status: Open.

#5194 In Clinical-Genomics/cg;

· emmadizdarevic opened on Jul 9, 2026

Less error-prone and simplify handling of variant_catalog for Nallo and Raredisease

Status: Open.

#5187 In Clinical-Genomics/cg;

· fellen31 opened on Jul 7, 2026

Harmonize rank model submissions to Scout

Status: Open.

#5186 In Clinical-Genomics/cg;

· fellen31 opened on Jul 7, 2026

Harmonize and make RANK_MODEL_THRESHOLD more accessible for raredisease

Status: Open.

#5184 In Clinical-Genomics/cg;

· fellen31 opened on Jul 7, 2026