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Unable to build clustering annotation from the command line

Status: Open.

#207 In BaderLab/AutoAnnotateApp;

· ghost opened on Sep 5, 2024

autoannotate-1.5.1-SNAPSHOT: Cytoscape freezes when I play with AA parameters (Annotation Display)

Status: Open.

#206 In BaderLab/AutoAnnotateApp;

· veroniquevoisin opened on May 15, 2024

Color EM nodes according to cluster

enhancement

Status: Open.

#205 In BaderLab/AutoAnnotateApp;

· mikekucera opened on Apr 3, 2024

still get the double annotation when I try to move an annotation

Status: Open.

#198 In BaderLab/AutoAnnotateApp;

· veroniquevoisin opened on Jan 31, 2024

Upgrade Java and Guice

Status: Open.

#195 In BaderLab/AutoAnnotateApp;

· mikekucera opened on Jul 25, 2023

Better Labels for clusters

Status: Open.

#189 In BaderLab/AutoAnnotateApp;

· mikekucera opened on Jun 9, 2023

Ellipses duplicated when a cluster is moved

Status: Open.

#187 In BaderLab/AutoAnnotateApp;

· veroniquevoisin opened on Mar 14, 2023

·  

1.5

post analysis edges + annotations very buggy - loosing nodes from the main network, randomly creating duplicates of nodes

bug

Status: Open.

#166 In BaderLab/AutoAnnotateApp;

· risserlin opened on Apr 19, 2021

·  

1.4.0

AA collapse all clusters a bunch of nodes together in one spot

bug

Status: Open.

#159 In BaderLab/AutoAnnotateApp;

· risserlin opened on Jan 5, 2021

·  

1.3.4

AA collapsed mode: adjust node size?

Status: Open.

#116 In BaderLab/AutoAnnotateApp;

· veroniquevoisin opened on Jan 9, 2018

Re-collapse gives error

bug

Status: Open.

#105 In BaderLab/AutoAnnotateApp;

· risserlin opened on Jul 26, 2017

label order sometimes different for cyrest command and summary network

bug

Status: Open.

#86 In BaderLab/AutoAnnotateApp;

· risserlin opened on Apr 13, 2017