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Issue with annotateWithFeatures

Status: Open.

#214 In BIMSBbioinfo/genomation;

· maf222 opened on Sep 25, 2024

Error when installing the package

Status: Open.

#213 In BIMSBbioinfo/genomation;

· Simple53 opened on Apr 29, 2024

ScoreMatrixBin not working in version 1.35.0

Status: Open.

#212 In BIMSBbioinfo/genomation;

· shuye2009 opened on Apr 1, 2024

Error in GenomicRangesList(features = feat, flanks = flanks) : could not find function "GenomicRangesList"

Status: Open.

#211 In BIMSBbioinfo/genomation;

· danli349 opened on Mar 6, 2024

Error in validObject(.Object) : invalid class "ScoreMatrix" object: superclass "mMatrix" not defined in the environment of the object's class

Status: Open.

#210 In BIMSBbioinfo/genomation;

· danli349 opened on Feb 22, 2024

Error while anotaton od methilation data for both maping to genes and CPG island

Status: Open.

#208 In BIMSBbioinfo/genomation;

· Kaustav-93 opened on Dec 10, 2023

Error during annotateWithGeneParts during methylation annotation.

Status: Open.

#207 In BIMSBbioinfo/genomation;

· desmodus1984 opened on Nov 20, 2023

readTranscriptFeatures default parameters

Status: Open.

#206 In BIMSBbioinfo/genomation;

· TSolDour opened on Dec 7, 2022

BedGraph support

Status: Open.

#204 In BIMSBbioinfo/genomation;

· fgualdr opened on Feb 9, 2022

Site upstream of transcription start site annotated as intronic

Status: Open.

#203 In BIMSBbioinfo/genomation;

· pkothiyal opened on Jan 26, 2022

output annotation meta columns

Status: Open.

#201 In BIMSBbioinfo/genomation;

· shawpa opened on May 18, 2021

[Feature request] Keep all windows in the scoreMatrix

Status: Open.

#197 In BIMSBbioinfo/genomation;

· balwierz opened on Jan 27, 2021