refactor: modify binpaths

Author: yoctoyotta1024

.github/workflows/pytest.yaml

@@ -48,7 +48,7 @@ jobs:
         run: |
           which python
           python_path=$(which python)
-          cmake  -S ./cleo_1dkid/ -B ./build \
+          cmake  -S ./cleo_1dkid/cleo_deps/ -B ./build \
             -DCMAKE_C_COMPILER=mpicc \
             -DCMAKE_CXX_COMPILER=mpic++ \
             -DCMAKE_CXX_FLAGS="-Werror -Wall -pedantic -Wno-unused-parameter -O3" \
@@ -94,4 +94,6 @@ jobs:
           echo "ls ./cleo_1dkid/share/cleo_initial_conditions/1dkid/fullscheme/" && ls ./cleo_1dkid/share/cleo_initial_conditions/1dkid/fullscheme/
 
       - name: Test with pytest
-        run: pytest ./cleo_1dkid/tests
+        run: |
+          mkdir ./build/bin/ && mkdir ./build/bin/generic/ && mkdir ./build/bin/condevap_only/ && mkdir ./build/bin/fullscheme/
+          pytest ./cleo_1dkid/tests

cleo_1dkid/share/cleo_initial_conditions/1dkid/condevap_only/config.yaml

@@ -51,9 +51,9 @@ initsupers:
 
 ### Output Parameters ###
 outputdata:
-  setup_filename : ./build/bin/1dkid_condevap_only_setup.txt     # .txt filename to copy configuration to
-  zarrbasedir : ./build/bin/1dkid_condevap_only_sol.zarr  # zarr store base directory
-  maxchunk : 2500000                         # maximum no. of elements in chunks of zarr store array
+  setup_filename : ./build/bin/condevap_only/setup.txt     # .txt filename to copy configuration to
+  zarrbasedir : ./build/bin/condevap_only/sol.zarr         # zarr store base directory
+  maxchunk : 2500000                                    # maximum no. of elements in chunks of zarr store array
 
 ### Microphysics Parameters ###
 microphysics:

cleo_1dkid/share/cleo_initial_conditions/1dkid/fullscheme/config.yaml

@@ -51,9 +51,9 @@ initsupers:
 
 ### Output Parameters ###
 outputdata:
-  setup_filename : ./build/bin/1dkid_fullscheme_setup.txt     # .txt filename to copy configuration to
-  zarrbasedir : ./build/bin/1dkid_fullscheme_sol.zarr  # zarr store base directory
-  maxchunk : 2500000                         # maximum no. of elements in chunks of zarr store array
+  setup_filename : ./build/bin/fullscheme/setup.txt     # .txt filename to copy configuration to
+  zarrbasedir : ./build/bin/fullscheme/sol.zarr         # zarr store base directory
+  maxchunk : 2500000                                    # maximum no. of elements in chunks of zarr store array
 
 ### Microphysics Parameters ###
 microphysics:

cleo_1dkid/share/cleo_initial_conditions/generic/config.yaml

@@ -56,9 +56,9 @@ initsupers:
 
 ### Output Parameters ###
 outputdata:
-  setup_filename : ./build/bin/setup.txt     # .txt filename to copy configuration to
-  zarrbasedir : ./build/bin/sol.zarr  # zarr store base directory
-  maxchunk : 2500000                         # maximum no. of elements in chunks of zarr store array
+  setup_filename : ./build/bin/generic/setup.txt                  # .txt filename to copy configuration to
+  zarrbasedir : ./build/bin/generic/sol.zarr                      # zarr store base directory
+  maxchunk : 2500000                                              # maximum no. of elements in chunks of zarr store array
 
 ### Pycleo (Python Bindings) Parameters ###
 pycleo: