More plots #880
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| name: pytest | |
| on: [push, pull_request] | |
| jobs: | |
| setup: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Cache YAXT | |
| id: cache_yaxt | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ runner.temp }}/yaxt/ | |
| key: ${{ runner.os }}-yaxt-cache-v0.11.4 | |
| restore-keys: | | |
| ${{ runner.os }}-yaxt- | |
| - name: Cache YAC | |
| id: cache_yac | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ runner.temp }}/yac/ | |
| key: ${{ runner.os }}-yac-cache-v3.6.2 | |
| restore-keys: | | |
| ${{ runner.os }}-yac- | |
| - name: Setup | |
| if: steps.cache_yaxt.outputs.cache-hit != 'true' || steps.cache_yac.outputs.cache-hit != 'true' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y \ | |
| cmake libopenmpi-dev openmpi-bin \ | |
| libnetcdff-dev liblapack-dev libfyaml-dev \ | |
| python3-dev python3-numpy python3-mpi4py python3-pip curl | |
| apt list --installed | |
| - name: Build YAXT | |
| if: steps.cache_yaxt.outputs.cache-hit != 'true' | |
| run: | | |
| mkdir yaxt-0.11.4 && cd yaxt-0.11.4 | |
| curl -s -L https://gitlab.dkrz.de/dkrz-sw/yaxt/-/archive/release-0.11.4/yaxt-0.11.4.tar.gz | tar xvz --strip-components=1 | |
| ./configure --without-regard-for-quality --without-example-programs \ | |
| --without-perf-programs --with-pic --prefix=${{ runner.temp }}/yaxt | |
| make -j 4 | |
| make install | |
| - name: Build YAC | |
| if: steps.cache_yac.outputs.cache-hit != 'true' | |
| run: | | |
| mkdir yac-v3.6.2 && cd yac-v3.6.2 | |
| curl -s -L https://gitlab.dkrz.de/dkrz-sw/yac/-/archive/v3.6.2/yac_v3.6.2.tar.gz | tar xvz --strip-components=1 | |
| ./configure CFLAGS="-fPIC" CC=mpicc FC=mpif90 --disable-mpi-checks \ | |
| --with-yaxt-root=${{ runner.temp }}/yaxt --prefix=${{ runner.temp }}/yac | |
| make -j 4 | |
| make install | |
| cleo_1dkid_tests: | |
| runs-on: ubuntu-latest | |
| needs: setup | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y \ | |
| cmake libopenmpi-dev openmpi-bin libopenblas-dev \ | |
| libnetcdff-dev liblapack-dev libfyaml-dev \ | |
| python3-dev python3-numpy python3-mpi4py python3-pip curl | |
| apt list --installed | |
| - name: Initialise Conda/Mamba | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: superdrops-in-action | |
| auto-activate-base: false | |
| use-mamba: true | |
| miniforge-version: 'latest' | |
| conda-remove-defaults: true | |
| - name: Update Mamba Environment | |
| run: | | |
| mamba env update -n superdrops-in-action -f environment.yaml | |
| - name: Mamba and Python Info | |
| run: | | |
| mamba info | |
| mamba list | |
| which python | |
| python --version | |
| - name: Restore YAXT Cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ runner.temp }}/yaxt/ | |
| key: ${{ runner.os }}-yaxt-cache-v0.11.4 | |
| - name: Restore YAC Cache | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ runner.temp }}/yac/ | |
| key: ${{ runner.os }}-yac-cache-v3.6.2 | |
| - name: Build Pybind11 module for C++ code | |
| run: | | |
| which python | |
| python_path=$(which python) | |
| cmake -S ./cleo_1dkid/cleo_deps/ -B ./build \ | |
| -DCMAKE_C_COMPILER=mpicc \ | |
| -DCMAKE_CXX_COMPILER=mpic++ \ | |
| -DCMAKE_CXX_FLAGS="-Werror -Wall -pedantic -Wno-unused-parameter -O3" \ | |
| -DKokkos_ARCH_NATIVE=ON -DKokkos_ENABLE_SERIAL=ON \ | |
| -DCLEO_COUPLED_DYNAMICS=numpy \ | |
| -DCLEO_DOMAIN=cartesian \ | |
| -DCLEO_YAXT_ROOT=${{ runner.temp }}/yaxt \ | |
| -DCLEO_YAC_ROOT=${{ runner.temp }}/yac \ | |
| -DCMAKE_MODULE_PATH=/home/runner/work/superdrops-in-action/superdrops-in-action/build/_deps/cleo-src/libs/coupldyn_yac/cmake \ | |
| -DCLEO_PYTHON=python_path | |
| cd build && pwd && make && cd .. | |
| - name: Compile CLEO python bindings | |
| run: cd build && make -j 64 cleo_python_bindings && cd .. | |
| - name: Download CLEO Initial Condition Files for Generic Test | |
| run: | | |
| mkdir -p ./cleo_1dkid/share/cleo_initial_conditions/generic/ | |
| curl https://swift.dkrz.de/v1/dkrz_8f1b1e92-f07c-41c5-a4ae-8089ec495d87/superdrops-in-action/cleo_1dkid/share/cleo_initial_conditions/generic/dimlessGBxboundaries.dat \ | |
| -o ./cleo_1dkid/share/cleo_initial_conditions/generic/dimlessGBxboundaries.dat | |
| curl https://swift.dkrz.de/v1/dkrz_8f1b1e92-f07c-41c5-a4ae-8089ec495d87/superdrops-in-action/cleo_1dkid/share/cleo_initial_conditions/generic/dimlessSDsinit.dat \ | |
| -o ./cleo_1dkid/share/cleo_initial_conditions/generic/dimlessSDsinit.dat | |
| pwd && echo "ls -l ./cleo_1dkid/share/cleo_initial_conditions/generic/" && ls -l ./cleo_1dkid/share/cleo_initial_conditions/generic/ | |
| - name: Download CLEO Initial Condition Files for 1-D KiD Test | |
| run: | | |
| mkdir -p ./build/share/ | |
| curl https://swift.dkrz.de/v1/dkrz_8f1b1e92-f07c-41c5-a4ae-8089ec495d87/superdrops-in-action/cleo_1dkid/share/cleo_initial_conditions/1dkid/dimlessGBxboundaries.dat \ | |
| -o ./build/share/dimlessGBxboundaries.dat | |
| curl https://swift.dkrz.de/v1/dkrz_8f1b1e92-f07c-41c5-a4ae-8089ec495d87/superdrops-in-action/cleo_1dkid/share/cleo_initial_conditions/1dkid/dimlessSDsinit.dat \ | |
| -o ./build/share/dimlessSDsinit.dat | |
| pwd && echo "ls -l ./build/share/" && ls -l ./build/share/ | |
| echo "ls -l ./cleo_1dkid/share/cleo_initial_conditions/1dkid/" && ls -l ./cleo_1dkid/share/cleo_initial_conditions/1dkid/ | |
| - name: Test with pytest | |
| run: | | |
| mkdir -p ./build/bin/generic/ && mkdir -p ./build/bin/condevap_only/ && mkdir -p ./build/bin/fullscheme/ | |
| pytest ./cleo_1dkid/tests/test_pympdata_bulk_microphysics_scheme.py -s | |
| pytest ./cleo_1dkid/tests/test_cleo_sdm_microphysics_scheme.py -s | |
| pytest ./cleo_1dkid/tests/test_case_1dkid/test_pympdata_bulk.py -s | |
| pytest ./cleo_1dkid/tests/test_case_1dkid/test_cleo_sdm_condevap_only.py -s | |
| pytest ./cleo_1dkid/tests/test_case_1dkid/test_cleo_sdm_fullscheme.py -s |