From translating a whole gene model, I'm getting mostly junk:

This looks kind of like when the reverse strand translation was off, but it seems almost worse. Multiexon transcripts are getting translated into a single amino acid and such... At least SnpEff works!
From translating a whole gene model, I'm getting mostly junk:

This looks kind of like when the reverse strand translation was off, but it seems almost worse. Multiexon transcripts are getting translated into a single amino acid and such... At least SnpEff works!