Good evening.
In the past days i tried to script my entire workflow in qupath.
The idea is to call QuPath from the CLI and pass the script and the project.
The script is ok when i run it from the GUI getting the images from my OMERO server.
The problem arises when i try to execute the script from the CLI. I can't understand if it's possible to and how i can pass my OMERO server credentials as an option to the image server builder.
I tried to read the code but, for my little understanding of the Java language, i didn't find anything.
Is there something that i'm missing?
Thank you for your patience.
Good evening.
In the past days i tried to script my entire workflow in qupath.
The idea is to call QuPath from the CLI and pass the script and the project.
The script is ok when i run it from the GUI getting the images from my OMERO server.
The problem arises when i try to execute the script from the CLI. I can't understand if it's possible to and how i can pass my OMERO server credentials as an option to the image server builder.
I tried to read the code but, for my little understanding of the Java language, i didn't find anything.
Is there something that i'm missing?
Thank you for your patience.