add-badge

Author: telatin

README.md

@@ -7,6 +7,7 @@
 https://anaconda.org/bioconda/dadaist2/badges/version.svg)](https://bioconda.github.io/recipes/dadaist2/README.html)
 [![Conda](https://anaconda.org/bioconda/dadaist2/badges/downloads.svg)](https://bioconda.github.io/recipes/dadaist2/README.html)
 [![Build Status](https://www.travis-ci.com/quadram-institute-bioscience/dadaist2.svg?branch=master)](https://www.travis-ci.com/quadram-institute-bioscience/dadaist2)
+[![Dadaist-CI](https://github.com/quadram-institute-bioscience/dadaist2/actions/workflows/blank.yml/badge.svg)](https://github.com/quadram-institute-bioscience/dadaist2/actions/workflows/blank.yml)
 
 Standalone wrapper for [DADA2](https://benjjneb.github.io/dada2/index.html) package, to quickly generate a feature table and a
 set of representative sequences from a folder with Paired End Illumina reads.

docs/README.md

@@ -9,6 +9,7 @@
 [![version](https://img.shields.io/conda/v/bioconda/dadaist2?label=bioconda)](https://bioconda.github.io/recipes/dadaist2/README.html)
 [![Conda](https://img.shields.io/conda/dn/bioconda/dadaist2)](https://bioconda.github.io/recipes/dadaist2/README.html)
 [![Build Status](https://www.travis-ci.com/quadram-institute-bioscience/dadaist2.svg?branch=master)](https://www.travis-ci.com/quadram-institute-bioscience/dadaist2)
+[![Dadaist-CI](https://github.com/quadram-institute-bioscience/dadaist2/actions/workflows/blank.yml/badge.svg)](https://github.com/quadram-institute-bioscience/dadaist2/actions/workflows/blank.yml)
 
 
 Standalone wrapper for [DADA2](https://benjjneb.github.io/dada2/index.html) package, to quickly generate a feature table and a

docs/notes/6_Rscripts.md

@@ -32,9 +32,13 @@ The manual R workflow [is available here](plot.html), while the Dadaist2 script
 
 The two workflow produce identical PhyloSeq objects and identical plots.
 
-<img src="img/r-taxa.png">
+
+<img src="../img/r-taxa.png">
+
 Taxonomy barplots (manually generated from R, _left_, and automatically generated, _right_)
 
-<img src="img/r-bubble.png">
+
+<img src="../img/r-bubble.png">
+
 Taxonomy bubble plots (manually generated from R, _left_, and automatically generated, _right_)