Cargo.toml

[package]
name = "ncbitaxonomy"
description = "Read NCBI Taxonomy Database from files and work with NCBI Taxonomy DB"
documentation = "https://docs.rs/ncbitaxonomy" # TODO: write better docs!!
version = "1.1.0"
authors = ["Peter van Heusden <pvh@sanbi.ac.za>"]
license = "MIT"
readme = "README.md"
repository = "https://github.com/pvanheus/ncbitaxonomy"
keywords = ["bioinformatics", "taxonomy"]
categories = ["command-line-utilities", "parser-implementations", "science"]
default-run = "taxonomy_util"
edition = "2024"

[badges]
github-actions = { repository = "pvanheus/ncbitaxonomy", workflow = "CI" }

[dependencies]
thiserror = "~2"
indextree = "~4"
bio = "~3"
clap = "~4"
seq_io = "~0.3"
flate2 = "~1"
diesel = { version = "~2", features = ["sqlite"] }
diesel_migrations = { version = "~2", features = ["sqlite"] }
dotenv = "~0.15"