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Update supported python versions and bring CI back to green #446

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Run time

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Job	Run time
others (manifest)	10s
Python 3.13	3m 0s
others (docs)	38s
Python 3.12	1m 49s
Python 3.10	1m 59s
Python 3.11	1m 40s
others (binder)	41s
	9m 57s