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            <strong>Equation-to-Artifact Verification (EQA)</strong><br>
            Deterministic verification process reproducing theoretical physics and mathematical breakthroughs as runnable, citable computational software (CI-tested Python, LaTeX source, and Zenodo DOI citations).
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            <strong>Biomolecular AI Validation (BAV)</strong><br>
            Governance validation of the RExSyn + NNSL pipeline: multi-model structural consensus (AF3, AF2, Boltz-2, Chai-1) and end-to-end reliability gating.
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            Deterministic static scanning auditing bioscience AI surfaces, checking clinical boundaries, safety limitations, and license compliance.
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            <span class="sb-folder-name">Methodology &amp; Frameworks</span>
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            <strong>Methodology &amp; Frameworks</strong><br>
            Reusable templates, operational frameworks, and practical code for deterministic AI verification and compliance auditing. Currently: HTML Effectiveness Template (blank, html-effectiveness framework, 9 document types). Frameworks and Practical Code in preparation.
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      <span>Public API</span>
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    <a id="ledger-version-tag" href="https://github.com/flamehaven01/Flamehaven-Verification-Ledger" target="_blank" rel="noopener" title="Flamehaven Verification Ledger — view repository on GitHub" style="margin-top:auto;display:flex;align-items:center;justify-content:space-between;flex-wrap:wrap;gap:6px;padding:10px 14px;border-top:1px solid var(--border);font-family:'JetBrains Mono',monospace;font-size:10.5px;color:var(--t4);text-decoration:none;">
      <span>Flamehaven Verification Ledger</span>
      <span class="lv-num" style="color:#10b981;font-weight:600;">v—</span>
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      This is the public verification record of Flamehaven's governance review work. For commercial services, blueprints, and methodologies, visit <a href="https://flamehaven.space" target="_blank" rel="noopener">flamehaven.space</a>.
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  <!-- HERO -->
  <div class="hero">
    <div class="hero-eyebrow">Flamehaven Labs</div>
    <h1>Verification <em>Ledger</em></h1>
    <p class="hero-desc">
      Public verification record for Flamehaven's governance reviews, physics verification runs, and biomedical audit scans. Every result is deterministic, locally executed, and fully inspectable.
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    <!-- Unified Ledger Views (Dashboard Guides nested inside individual lanes) -->
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  <!-- ARCHIVE DESCRIPTION & TRUST MISSION -->
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      What is the Flamehaven Verification Ledger?
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    <p class="mission-text">
      The <strong>Flamehaven Verification Ledger</strong> is a transparent, reproducible public ledger of all capability evaluations, mathematical physics verification runs, and biomedical AI governance audits executed by Flamehaven.
    </p>
    <p class="mission-text">
      Every log and audit report published here is fully local and deterministic—run without network dependencies or external LLM layers, so the results can be reproduced from repository state.
    </p>
  </div>

  <!-- PORTAL INTRO -->
  <div class="portal-intro">
    <div class="portal-intro-header">
      <div class="portal-intro-eyebrow">Flamehaven Verification Ledger</div>
      <h2 class="portal-intro-title">Portal Overview &amp; Verification Engines</h2>
    </div>
    <div class="portal-intro-grid">
      <!-- Card 1: EQA -->
      <div class="portal-intro-card" onclick="openCollection('toe')">
        <div class="portal-intro-card-title">
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          Equation-to-Artifact (EQA)
        </div>
        <p class="portal-intro-card-desc">
          Verifies theoretical math and physics breakthroughs by reproducing published equations as runnable, citable, and testable computational software.
        </p>
        <div class="portal-intro-card-status active">
          <span class="status-dot"></span>
          <span>1 Paper / 53 Runs Active</span>
        </div>
      </div>

      <!-- Card 2: BAV -->
      <div class="portal-intro-card" onclick="openCollection('rexsyn')">
        <div class="portal-intro-card-title">
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            <path d="M8 1.5L2 4.5v4.25c0 3.75 6 5.75 6 5.75s6-2 6-5.75V4.5l-6-3z" stroke-linecap="round" stroke-linejoin="round"/>
          </svg>
          Biomolecular AI Validation (BAV)
        </div>
        <p class="portal-intro-card-desc">
          Governs biomedical AI pipelines. Surfaces 34 experiments through 6 live cards, with one grouped truthful-null sub-series and a 26-entry foundational archive.
        </p>
        <div class="portal-intro-card-status active">
          <span class="status-dot"></span>
          <span>34 Experiments · 6 Live Cards</span>
        </div>
      </div>

      <!-- Card 3: BSC -->
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          Bioscience Compliance (BSC)
        </div>
        <p class="portal-intro-card-desc">
          Deterministic static scanning auditing bioscience AI surfaces. Evaluates clinical boundaries and dependency risks without runtime hazards.
        </p>
        <div class="portal-intro-card-status active">
          <span class="status-dot"></span>
          <span>2 Reports Active</span>
        </div>
      </div>

      <!-- Card 4: Methodology & Frameworks -->
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          Methodology &amp; Frameworks
        </div>
        <p class="portal-intro-card-desc">
          Review dashboards, verification blueprints, and compliance mapping frameworks demonstrating systematic review methods.
        </p>
        <div class="portal-intro-card-status active">
          <span class="status-dot"></span>
          <span>1 Framework Active (v3)</span>
        </div>
      </div>
    </div>
  </div>

  <!-- TOE PROJECT DASHBOARD -->
  <div class="project-dashboard" id="dashboard-toe">
    <div class="project-dashboard-header">
      <div class="project-dashboard-eyebrow">Equation-to-Artifact (EQA)</div>
      <h2 class="project-dashboard-title">Mathematical &amp; Physical Verification Ledger</h2>
      <p class="project-dashboard-desc">
        Independent, deterministic reproduction of mathematical proofs, physics models, and discrete geometry equations. Rather than generating ungrounded hypotheses, this ledger validates theoretical claims by turning abstract formulas into executable, citable, and testable scientific software.
      </p>
    </div>

    <div class="dashboard-grid">
      <div class="dashboard-card">
        <div class="dashboard-card-title">
          <svg class="portal-intro-card-icon" viewBox="0 0 16 16" fill="none" stroke="currentColor" stroke-width="1.5">
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          </svg>
          EQA Protocol
        </div>
        <p class="dashboard-card-desc">
          Structured conversion of abstract mathematical equations to verified digital software:
        </p>
        <ul class="dashboard-list">
          <li><strong>Step 1: Precision Lock</strong>: Re-deriving equations using arbitrary-precision libraries (e.g. <code>mpmath</code>) to prevent standard underflow/catastrophic cancellation.</li>
          <li><strong>Step 2: Constraint Verification</strong>: Checking local constraints, bounds, and algebraic-geometric admissibility programmatically.</li>
          <li><strong>Step 3: CI/CD Proof-of-Work</strong>: Regression testing codebases across multiple OS platforms and environments.</li>
        </ul>
      </div>

      <div class="dashboard-card">
        <div class="dashboard-card-title">
          <svg class="portal-intro-card-icon" viewBox="0 0 16 16" fill="none" stroke="currentColor" stroke-width="1.5">
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            <circle cx="12" cy="12" r="2.5"/>
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          Scholarly Archival Alignment
        </div>
        <p class="dashboard-card-desc">
          Ensuring verified math software is fit for peer-reviewed citation:
        </p>
        <ul class="dashboard-list">
          <li><strong>Citable Metadata</strong>: Enforcing standardized <code>CITATION.cff</code> and Zenodo integrations to issue immutable DOIs.</li>
          <li><strong>Provenance Manifests</strong>: Freezing SHA-256 cryptographic signatures of code files to verify execution immutability.</li>
          <li><strong>Audit Disclosures</strong>: Exposing explicit LaTeX paper sources alongside codebases to document deviations from literature.</li>
        </ul>
      </div>
    </div>

    <!-- EQA Filter Pill Bar -->
    <div class="eq-filter-bar" style="display: flex; gap: 8px; margin-top: 40px; margin-bottom: 24px; border-bottom: 1px solid var(--border); padding-bottom: 12px; align-items: center; justify-content: flex-start; flex-wrap: wrap;">
      <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; text-transform: uppercase; color: var(--t4); margin-right: 16px;">Filter Ledger:</span>
      <button class="eq-filter-pill active" onclick="filterEqLedger('all', this)" style="background: rgba(255,255,255,0.02); border: 1px solid var(--border); color: var(--t3); padding: 4px 12px; border-radius: var(--r-md); cursor: pointer; font-size: 12px; font-family: 'JetBrains Mono', monospace; transition: all 0.15s;">All</button>
      <button class="eq-filter-pill" onclick="filterEqLedger('verification-run', this)" style="background: rgba(255,255,255,0.02); border: 1px solid var(--border); color: var(--t4); padding: 4px 12px; border-radius: var(--r-md); cursor: pointer; font-size: 12px; font-family: 'JetBrains Mono', monospace; transition: all 0.15s;">Verification Runs</button>
      <button class="eq-filter-pill" onclick="filterEqLedger('non-run', this)" style="background: rgba(255,255,255,0.02); border: 1px solid var(--border); color: var(--t4); padding: 4px 12px; border-radius: var(--r-md); cursor: pointer; font-size: 12px; font-family: 'JetBrains Mono', monospace; transition: all 0.15s;">Non-Run Artifacts</button>

      <!-- Local search input -->
      <div class="local-search-wrap" style="margin-left: auto; position: relative; display: flex; align-items: center; min-width: 200px;">
        <svg class="search-icon" viewBox="0 0 14 14" fill="none" stroke="currentColor" stroke-width="1.5" style="position: absolute; left: 8px; width: 11px; height: 11px; color: var(--t5); pointer-events: none;">
          <circle cx="5.5" cy="5.5" r="4"/>
          <path d="M9 9l3.5 3.5" stroke-linecap="round"/>
        </svg>
        <input type="text" id="eq-local-search" placeholder="Search math runs..." oninput="handleLocalSearch('toe')" autocomplete="off" style="width: 100%; padding: 5px 8px 5px 26px; background: rgba(0,0,0,0.2); border: 1px solid var(--border); border-radius: var(--r-md); color: var(--tp); font-family: 'Inter', sans-serif; font-size: 11px; outline: none; transition: border-color 0.15s;">
      </div>
    </div>

    <!-- Vertical Stack for EQA Cards -->
    <div class="eq-ledger-list" style="display: flex; flex-direction: column; gap: 16px; margin-top: 16px;">

      <!-- EQA cards rendered from eqa-registry.js by renderEqaCards() -->
      <div id="eqa-cards-container" style="display:flex;flex-direction:column;gap:16px;"></div>

      <!-- CARD 6: EQA-ARCHIVE-0001 (Historical Runs Registry 1-51) -->
      <article class="eq-card" id="eqa-card-archive" data-kind="verification-run" data-class="verification-run" style="display: flex; flex-direction: column; background: rgba(255,255,255,0.01); border: 1px solid var(--border); border-radius: var(--r-xl); padding: 24px; transition: border-color 0.2s, transform 0.2s; position: relative;">
        <div style="display: flex; justify-content: space-between; align-items: center; margin-bottom: 12px; flex-wrap: wrap; gap: 8px;">
          <div style="display: flex; align-items: center; gap: 10px;">
            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: var(--t4); background: rgba(255,255,255,0.02); border: 1px solid var(--border); padding: 2px 8px; border-radius: var(--r-xs);">EQA-ARCHIVE</span>
            <span style="font-size: 12px; color: var(--t4);">TOE-TEST-0001 ~ 0051</span>
          </div>
          <span class="tier-chip tb-t4" style="margin: 0; padding: 2px 10px; font-size: 10px; text-transform: uppercase; color:#9ca3af; border-color: rgba(156,163,175,0.2);">
            <span class="tier-dot" style="background:#9ca3af"></span>
            <span class="tier-chip-label">Historical Records</span>
          </span>
        </div>
        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          TOE-TEST Foundational Runs (0001 ~ 0051)
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 16px 0; max-width: 800px;">
          The foundational Flamehaven-TOE experiment series that preceded the active EQA ledger (0052+): string-theory / topology physics, quantum-biology and protein spin-qubit studies, and the verification-methodology layers themselves. Each entry opens the <strong>verbatim source report</strong> in the Ledger Inspector (local-workspace paths sanitized; report content unedited). Ordered most-recent first.
        </p>

        <!-- Real TOE-TEST foundational-run archive (data-driven from eqa/archive/manifest.json) -->
        <div style="margin-top: 8px; border: 1px solid var(--border); border-radius: var(--r-md); background: rgba(0,0,0,0.15); overflow: hidden; display: flex; flex-direction: column;">
          <div style="display: flex; justify-content: space-between; align-items: center; padding: 10px 16px; border-bottom: 1px solid var(--border); background: rgba(255,255,255,0.02); flex-wrap: wrap; gap: 8px;">
            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: var(--ts); display: flex; align-items: center; gap: 6px;">
              <span style="width: 6px; height: 6px; border-radius: 50%; background: #6b7280; display: inline-block;"></span>
              Foundational Runs
            </span>
            <input type="text" id="eqa-archive-search" placeholder="Search runs..." oninput="handleEqaArchiveSearch()" style="padding: 4px 8px; background: rgba(0,0,0,0.3); border: 1px solid var(--border); border-radius: 4px; color: var(--tp); font-family: 'Inter', sans-serif; font-size: 10.5px; outline: none; width: 180px;">
          </div>
          <div id="eqa-archive-list" style="max-height: 220px; overflow-y: auto; padding: 8px; display: flex; flex-direction: column; gap: 6px;">
            <!-- Populated dynamically via renderEqaArchive() -->
          </div>
        </div>

        <p style="font-size: 11.5px; color: var(--t5); line-height: 1.5; margin: 16px 0 0 0; border-top: 1px solid var(--border); padding-top: 14px;">
          Click any run above to open its verbatim report and provenance in the Ledger Inspector.
        </p>
      </article>

    </div><!-- /eq-ledger-list -->
  </div>

  <!-- BAV PROJECT DASHBOARD -->
  <div class="project-dashboard" id="dashboard-bav">
    <div class="project-dashboard-header">
      <div class="project-dashboard-eyebrow">Biomolecular AI Validation (BAV)</div>
      <h2 class="project-dashboard-title">Biomolecular AI Validation Ledger</h2>
      <p class="project-dashboard-desc">
        Validates whether an <em>entire</em> biomedical AI pipeline — RExSyn reasoning + NNSL resonance + LawBinder governance — deserves trust, not just whether one model looks confident. Treats model disagreement as signal, gates fail-closed, and keeps accepted results separate from held diagnostics.
      </p>
    </div>

    <div class="dashboard-grid">
      <!-- Governance Protocol -->
      <div class="dashboard-card">
        <div class="dashboard-card-title">
          <svg class="portal-intro-card-icon" viewBox="0 0 16 16" fill="none" stroke="currentColor" stroke-width="1.5">
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          Governance Protocol
        </div>
        <p class="dashboard-card-desc">
          How a multi-engine pipeline is judged trustworthy — disagreement, honesty, and chain reliability:
        </p>
        <ul class="dashboard-list">
          <li><strong>Multi-Model Disagreement</strong>: AlphaFold 3 / 2 / Chai-1 / Boltz-2 cross-validation. Rising drift exposes hidden topology conflict — disagreement is signal, not noise (KEEP_OBSERVER when convergence fails).</li>
          <li><strong>Honesty Gating (SR9 / DI2)</strong>: Cross-domain resonance must clear SR9 &ge; 0.70 and logical drift DI2 &le; 0.30; the pipeline abstains rather than hallucinate confidence.</li>
          <li><strong>End-to-End Reliability</strong>: <code>p_e2e = capture &times; transfer &times; model &times; clinical</code>, with LawBinder fail-closed escalation to human review.</li>
        </ul>
      </div>

      <!-- Governance Reproducibility -->
      <div class="dashboard-card">
        <div class="dashboard-card-title">
          <svg class="portal-intro-card-icon" viewBox="0 0 16 16" fill="none" stroke="currentColor" stroke-width="1.5">
            <line x1="3" y1="4" x2="13" y2="4" stroke-linecap="round"/>
            <line x1="3" y1="8" x2="13" y2="8" stroke-linecap="round"/>
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            <circle cx="12" cy="12" r="2.5"/>
            <path d="M14 14l1.5 1.5" stroke-linecap="round"/>
          </svg>
          Governance Reproducibility
        </div>
        <p class="dashboard-card-desc">
          Why each verdict is auditable and how accepted results stay clean:
        </p>
        <ul class="dashboard-list">
          <li><strong>Path Separation</strong>: An accepted legacy-replay anchor is never blended with a held current-regeneration path — controlled expansion without breaking the PASS/BLOCK baseline.</li>
          <li><strong>Provenance Manifests</strong>: Verbatim run payloads frozen with SHA-256; all card values are live-fetched from them, never hardcoded.</li>
          <li><strong>Honest Scope</strong>: Pipeline reliability &amp; governance only — explicitly not clinical efficacy, with disabled features disclosed.</li>
        </ul>
      </div>
    </div>

    <!-- Metrics & Engines Glossary (external-readable definitions of internal terms) -->
    <details style="margin-top: 20px; border: 1px solid var(--border); border-radius: var(--r-md); background: rgba(255,255,255,0.01); overflow: hidden;">
      <summary style="cursor: pointer; padding: 12px 16px; font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; text-transform: uppercase; letter-spacing: 0.06em; color: var(--t3); list-style: none;">📖 Metrics &amp; Engines — Glossary</summary>
      <div style="padding: 0 16px 16px; display: grid; grid-template-columns: repeat(auto-fit, minmax(260px, 1fr)); gap: 10px;">
        <div style="grid-column: 1 / -1; font-size: 11.5px; color: var(--t4); line-height: 1.6; border-bottom: 1px solid var(--border); padding-bottom: 10px; margin-bottom: 2px;">
          Each metric is tagged by where its authority comes from:
          <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#10b981;border:1px solid #10b98155;border-radius:3px;padding:0 4px;text-transform:uppercase;">EXTERNAL</span> third-party-defined &amp; checkable ·
          <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#60a5fa;border:1px solid #60a5fa55;border-radius:3px;padding:0 4px;text-transform:uppercase;">DERIVED</span> recomputable from external inputs ·
          <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#eab308;border:1px solid #eab30855;border-radius:3px;padding:0 4px;text-transform:uppercase;">RULE</span> deterministic rule citing an external basis ·
          <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> Flamehaven internal, <em>not externally validated</em>.
        </div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">SR9</strong> <span style="color:var(--t5);">(Scientific Resonance)</span> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> — cross-domain consistency: does the reasoning stay coherent across chemistry, genomics, and proteomics? Higher is better (guard &ge; 0.70).</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">DI2</strong> <span style="color:var(--t5);">(Dimensional Integrity)</span> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> — reasoning drift: internal contradiction across inference steps. Lower is better (guard &le; 0.30).</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">NNSL</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> — the Flamehaven semantic-resonance engine that computes SR9 / DI2 (internal).</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">RExSyn</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> — the Flamehaven hypothesis-synthesis engine (multi-validator); runs observer-first.</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">LawBinder</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#eab308;border:1px solid #eab30855;border-radius:3px;padding:0 4px;text-transform:uppercase;">RULE</span> — a fail-closed governance gate that escalates to human review when uncertain.</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">LOGOS</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> — Flamehaven's internal multi-engine reasoning orchestrator: coordinates inference across several solver engines under LawBinder governance; candidate generator for the EQA intake gate. (Codename, not a claim of autonomy.)</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">TOE</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#9ca3af;border:1px solid #9ca3af55;border-radius:3px;padding:0 4px;text-transform:uppercase;">ADVISORY</span> — the mathematical-model verification engine: turns candidate physics models into runnable, gated checks (run IDs <code style="font-family:'JetBrains Mono',monospace;">TOE-TEST-NNNN</code>). Named for the Theory-of-Everything physics it tests against — it does not claim to be one.</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">p_e2e</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#60a5fa;border:1px solid #60a5fa55;border-radius:3px;padding:0 4px;text-transform:uppercase;">DERIVED</span> — end-to-end reliability = capture &times; transfer &times; model &times; clinical (recomputable from the shown factors).</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">pLDDT / PAE / pTM</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#10b981;border:1px solid #10b98155;border-radius:3px;padding:0 4px;text-transform:uppercase;">EXTERNAL</span> — standard AlphaFold confidence metrics (per-residue confidence, predicted aligned error, predicted TM-score), defined by DeepMind/EBI.</div>
        <div style="font-size: 12.5px; color: var(--t3); line-height: 1.55;"><strong style="color: var(--ts);">Brier / ECE</strong> <span style="font-family:'JetBrains Mono',monospace;font-size:8.5px;color:#10b981;border:1px solid #10b98155;border-radius:3px;padding:0 4px;text-transform:uppercase;">EXTERNAL</span> — standard calibration metrics (probability accuracy; lower is better).</div>
      </div>
    </details>

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      <!-- CARD 0: ENGINE OVERVIEW (RExSyn / NNSL governance context) -->
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            <span style="font-size: 12px; color: var(--t4);">RExSyn + NNSL</span>
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            Context
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        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          What This Lane Validates: the RExSyn + NNSL Governance Chain
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 16px 0; max-width: 820px;">
          BAV does not do drug discovery — it validates whether a biomedical AI <em>pipeline</em> deserves trust. Two engines anchor the chain, themselves audited for code health (pipeline-insight Omega):
        </p>
        <ul class="dashboard-list" style="margin: 0 0 18px 0;">
          <li><strong>RExSyn (Nexus)</strong> — trinity hypothesis + multi-validator synthesis. Audited Omega <code>0.665 (Revoked)</code>: runs observer-first, not as an accepted decision-maker.</li>
          <li><strong>NNSL</strong> — semantic resonance / governance verification (SR9 cross-domain coherence, DI2 logical drift). Audited Omega <code>0.919 (Certified)</code>.</li>
          <li><strong>LawBinder</strong> — fail-closed policy gate: escalates to human review when uncertain, never silently approves.</li>
        </ul>
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          <a class="eq-slot-btn" href="https://flamehaven.space/writing/what-an-ai-reasoning-engine-built-for-alzheimers-metabolic-research-a-code-walkthrough/" target="_blank" rel="noopener" style="display: flex; align-items: center; gap: 8px; text-decoration: none; font-family: 'JetBrains Mono', monospace; font-size: 12px; color: var(--t3); background: rgba(255,255,255,0.03); border: 1px solid var(--border); padding: 8px 16px; border-radius: var(--r-md); transition: all 0.15s;">
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            RExSyn Walkthrough
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          <a class="eq-slot-btn" href="https://flamehaven.space/writing/when-adding-chai-1-and-boltz-2-exposed-hidden-model-disagreementtrinity-protocol-part/" target="_blank" rel="noopener" style="display: flex; align-items: center; gap: 8px; text-decoration: none; font-family: 'JetBrains Mono', monospace; font-size: 12px; color: var(--t3); background: rgba(255,255,255,0.03); border: 1px solid var(--border); padding: 8px 16px; border-radius: var(--r-md); transition: all 0.15s;">
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            Trinity Protocol II
          </a>
        </div>
      </article>

      <!-- CARD 4: EXP-034 METHODLOCK-MODAL-EXPANSION (Path Separation) -->
      <article class="bav-card" id="bav-card-0034" data-status="published" style="display: flex; flex-direction: column; background: rgba(255,255,255,0.01); border: 1px solid var(--border); border-radius: var(--r-xl); padding: 24px; transition: border-color 0.2s, transform 0.2s; position: relative;">
        <div style="display: flex; justify-content: space-between; align-items: center; margin-bottom: 12px; flex-wrap: wrap; gap: 8px;">
          <div style="display: flex; align-items: center; gap: 10px;">
            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: #10b981; background: rgba(16, 185, 129, 0.1); border: 1px solid rgba(16, 185, 129, 0.2); padding: 2px 8px; border-radius: var(--r-xs);">EXP-034 · METHODLOCK</span>
            <span style="font-size: 12px; color: var(--t4);">2026-04-19</span>
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            GO · Path Held
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        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          When a Pipeline Passes — But One Path Must Still Be Held
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 20px 0; max-width: 800px;">
          Modal expansion (AlphaFold-EBI observer, AlphaGenome live) was admitted only after the parity anchor reproduced. The legacy-replay path was accepted (GO); the current-regeneration path was held (HOLD) rather than blended into success.
          <strong style="color:var(--ts); display: block; margin-top: 6px;">Result: Final stage gate = PASS for the accepted anchor, with a separate diagnostic HOLD for current regeneration. Accuracy delta stayed 0.0: non-degradation, not repair.</strong>
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            Note
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        </div>
      </article>
      <!-- CARD 3: EXP-033 LAWBINDER-CRITIC-ALIGNMENT (Pipeline-Level Validation) -->
      <article class="bav-card" id="bav-card-0033" data-status="published" style="display: flex; flex-direction: column; background: rgba(255,255,255,0.01); border: 1px solid var(--border); border-radius: var(--r-xl); padding: 24px; transition: border-color 0.2s, transform 0.2s; position: relative;">
        <div style="display: flex; justify-content: space-between; align-items: center; margin-bottom: 12px; flex-wrap: wrap; gap: 8px;">
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            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: #60a5fa; background: rgba(96, 165, 250, 0.1); border: 1px solid rgba(96, 165, 250, 0.2); padding: 2px 8px; border-radius: var(--r-xs);">EXP-033 · LAWBINDER-CRITIC</span>
            <span style="font-size: 12px; color: var(--t4);">2026-03-10</span>
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            Pipeline Audit
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        </div>
        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          How Do You Know the Entire Pipeline Is Wrong — Not Just One Model?
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 20px 0; max-width: 800px;">
          Validating each model in isolation missed the chain failure. Against the EXP-032 parity baseline, EXP-033 current repro2 drove all PASS-eligible controls to BLOCK while keeping dangerous false-pass at zero.
          <strong style="color:var(--ts); display: block; margin-top: 6px;">Result: balanced accuracy fell to 0.50, pass recall collapsed to 0.00, and rule routing shifted from R6_pass to R5_e2e_floor. This is a pipeline failure record, not a model victory.</strong>
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            Note
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        </div>
      </article>
      <!-- CARD 2: EXP-032 ADAPTIVE-GATE (Governance) -->
      <article class="bav-card" id="bav-card-0032" data-status="published" style="display: flex; flex-direction: column; background: rgba(255,255,255,0.01); border: 1px solid var(--border); border-radius: var(--r-xl); padding: 24px; transition: border-color 0.2s, transform 0.2s; position: relative;">
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            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: #10b981; background: rgba(16, 185, 129, 0.1); border: 1px solid rgba(16, 185, 129, 0.2); padding: 2px 8px; border-radius: var(--r-xs);">EXP-032 · ADAPTIVE-GATE</span>
            <span style="font-size: 12px; color: var(--t4);">2026-03-07</span>
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            Verdict GO
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        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          Adaptive Gate: Pipeline Governance &amp; PASS/BLOCK Discrimination
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 20px 0; max-width: 800px;">
          Accepted legacy-replay parity anchor for the RExSyn + NNSL governance chain. The benchmark spans two labeled control classes expanded into six arm payloads; current-regeneration outputs are diagnostic-only and excluded from success claims.
          <strong style="color:var(--ts); display: block; margin-top: 6px;">Result: Clinical parity is GO (PASS->PASS, BLOCK->BLOCK, dangerous false-pass 0.0), but LawBinder still returns ESCALATE on both classes. Shadow hints are non-binding, strict-evidence recheck still fails, and the replay remains governance-only rather than a production gate activation.</strong>
        </p>

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            Note
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      </article>
      <!-- CARD 1: EXP-031 OOD-ABLATION (Multi-Model Disagreement) -->
      <article class="bav-card" id="bav-card-0031" data-status="published" style="display: flex; flex-direction: column; background: rgba(255,255,255,0.01); border: 1px solid var(--border); border-radius: var(--r-xl); padding: 24px; transition: border-color 0.2s, transform 0.2s; position: relative;">
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            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: #eab308; background: rgba(234, 179, 8, 0.1); border: 1px solid rgba(234, 179, 8, 0.2); padding: 2px 8px; border-radius: var(--r-xs);">EXP-031 · OOD-ABLATION</span>
            <span style="font-size: 12px; color: var(--t4);">2026-02-09</span>
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          <span class="tier-chip tb-t2" style="margin: 0; padding: 2px 10px; font-size: 10px; text-transform: uppercase;">
            <span class="tier-dot" style="background:#eab308"></span>
            Keep Observer
          </span>
        </div>
        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          Trinity Protocol: Multi-Model Disagreement Under Out-of-Distribution Stress
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 20px 0; max-width: 800px;">
          Cross-checked AF2 / AF3 / Boltz-2 / Chai-1 artifact metrics on an out-of-distribution protein-ligand target across three observer-only validator arms. AlphaGenome participated as a redesign engine, not as a direct validator score source. Adding independent validators <em>increased</em> structural disagreement rather than reducing it — exposing topology conflict invisible to any single model.
          <strong style="color:var(--ts); display: block; margin-top: 6px;">Result: All arms returned "Unverified (Drift Detected)" / failed convergence. Manual validator metrics were preserved as observer-only evidence, promotion evidence remained insufficient, and the disposition stayed KEEP_OBSERVER (do not target).</strong>
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          <a class="eq-slot-btn" href="https://github.com/flamehaven01/Flamehaven-Verification-Ledger/tree/main/bav/exp-031/reproduce" target="_blank" rel="noopener" title="Independent re-run scaffold: input.fasta + models + recorded reference run. Re-foldable on public AlphaFold; deviations expected (model non-determinism)." style="display: flex; align-items: center; gap: 8px; text-decoration: none; font-family: 'JetBrains Mono', monospace; font-size: 12px; color: var(--t3); background: rgba(255,255,255,0.03); border: 1px solid var(--border); padding: 8px 16px; border-radius: var(--r-md); transition: all 0.15s;">
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            [Paper]
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      </article>
      <!-- CARD 0: EXP-028 POST-OVERLAY (Honesty Test) -->
      <article class="bav-card" id="bav-card-0028" data-status="published" style="display: flex; flex-direction: column; background: rgba(255,255,255,0.01); border: 1px solid var(--border); border-radius: var(--r-xl); padding: 24px; transition: border-color 0.2s, transform 0.2s; position: relative;">
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            <span style="font-family: 'JetBrains Mono', monospace; font-size: 11px; font-weight: 600; color: #ef4444; background: rgba(239, 68, 68, 0.1); border: 1px solid rgba(239, 68, 68, 0.2); padding: 2px 8px; border-radius: var(--r-xs);">EXP-028 · POST-OVERLAY</span>
            <span style="font-size: 12px; color: var(--t4);">2026-02-05</span>
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            Honest Abstain
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        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          The Honesty Test: It Looked Perfect, Then It Failed
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 20px 0; max-width: 800px;">
          Integrating AlphaFold 3 + AlphaGenome produced confident, well-calibrated outputs — yet the honesty check (SR9 cross-domain resonance, DI2 logical drift) flagged contradictory reasoning on a very small pilot.
          <strong style="color:var(--ts); display: block; margin-top: 6px;">Result: Brier 0.0056 and AUC 1.0 are real, but phase1 used only 6 samples, phase3 tested only 2, and the deployed gate fell back from 0.5 to 0.075 with Youden J = 0. The honest result is not "perfect performance." It is a tiny fallback-gated pilot that refuses to overclaim.</strong>
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      <!-- CARD 0b: EXP-005~007 / SEP Upadacitinib (Truthful Null) -->
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            <span style="font-size: 12px; color: var(--t4);">2026-01-24</span>
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            Truthful Null
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        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          How Failing in 2 Hours Saved 8 Months — Upadacitinib Topical Formulation
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 20px 0; max-width: 800px;">
          Early RExSyn line-first control runs screened three lipid-based carriers (SLN, NLC, Liposomal Gel) for topical Upadacitinib, with manual fact injection present upstream and the NNSL SR9 honesty gate (&ge; 0.80) deciding eligibility.
          <strong style="color:var(--ts); display: block; margin-top: 6px;">Result: all three carriers scored SR9 ~0.23&ndash;0.28 and were rejected. The useful finding is the honest null, not a fully autonomous pipeline win: the public record now exposes the manual-assisted provenance, the validator split, and the fact that the active decision window was ~2 hours after separate literature pre-work.</strong>
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      <!-- CARD 5: BAV ARCHIVE (Foundational Iterations EXP-001~030) -->
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            <span style="font-size: 12px; color: var(--t4);">2026-01~04</span>
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            Archived
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        <h3 style="font-size: 18px; font-weight: 600; color: var(--ts); margin: 0 0 10px 0;">
          Foundational Iterations (EXP-001 ~ 030)
        </h3>
        <p style="font-size: 13.5px; color: var(--t3); line-height: 1.6; margin: 0 0 16px 0; max-width: 800px;">
          The early RExSyn / NNSL iteration sequence that established the trinity-consensus, multimodal, and governance primitives. Experiments EXP-028 and EXP-031~034 graduated from this lineage into full ledger cards above. Archived as historical record — reproducibility / governance only.
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              Foundational Iteration Registry (26 experiments)
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  <section class="collection-section" id="coll-bsc" data-coll="bsc">

    <!-- BSC PROJECT DASHBOARD -->
    <div class="project-dashboard" id="dashboard-bsc" style="display: block; margin-bottom: 32px;">
      <div class="project-dashboard-header">
        <div class="project-dashboard-eyebrow">Bioscience Compliance (BSC)</div>
        <h2 class="project-dashboard-title">Bioscience Repository Compliance Ledger</h2>
        <p class="project-dashboard-desc">
          Deterministic static scanning auditing bioscience AI surfaces. Evaluates clinical boundaries, safety limitations, and license compliance to enforce safe, transparent distribution.
        </p>
      </div>