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Package: enrichplot
Title: Visualization of Functional Enrichment Result
Version: 1.33.0.001
Authors@R: c(
person(given = "Guangchuang", family = "Yu", email = "guangchuangyu@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-6485-8781"))
)
Description: The 'enrichplot' package provides visualization methods for interpreting functional enrichment results from ORA or GSEA analyses.
It is designed to work with the 'clusterProfiler' ecosystem and builds on 'ggplot2' for flexible and extensible graphics.
Depends: R (>= 4.2.0)
Imports:
aplot (>= 0.2.1),
DOSE,
dplyr,
enrichit (>= 0.1.6),
ggfun (>= 0.1.7),
ggnewscale,
ggplot2 (>= 3.5.0),
ggrepel (>= 0.9.0),
ggtangle (>= 0.0.9),
ggtree,
GOSemSim (>= 2.37.2),
graphics,
grid,
igraph,
methods,
purrr,
RColorBrewer,
reshape2,
rlang,
scatterpie,
stats,
tidydr,
utils,
yulab.utils (>= 0.2.2)
Suggests:
AnnotationDbi,
clusterProfiler,
europepmc,
ggarchery,
ggforce,
ggHoriPlot,
ggplotify,
ggridges,
ggstar,
ggtreeExtra,
ggupset,
glue,
grDevices,
gridExtra,
gson,
org.Hs.eg.db,
quarto,
scales,
testthat (>= 3.0.0),
tibble,
tidyr
VignetteBuilder: quarto
License: Artistic-2.0
URL: https://yulab-smu.top/contribution-knowledge-mining/
BugReports: https://github.com/GuangchuangYu/enrichplot/issues
biocViews: Annotation, GeneSetEnrichment, GO, KEGG,
Pathways, Software, Visualization
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Config/roxygen2/version: 8.0.0
Config/testthat/edition: 3