diff --git a/tools/bioconductor-scp/bioconductor_scp.xml b/tools/bioconductor-scp/bioconductor_scp.xml
index 461580a3..d1ee8d48 100644
--- a/tools/bioconductor-scp/bioconductor_scp.xml
+++ b/tools/bioconductor-scp/bioconductor_scp.xml
@@ -9,12 +9,12 @@
     </xrefs>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">bioconductor-scp</requirement>
-        <requirement type="package" version="3.54.0">bioconductor-sva</requirement>
-        <requirement type="package" version="1.80.0">bioconductor-impute</requirement>
-        <requirement type="package" version="1.34.0">bioconductor-scater</requirement>
-        <requirement type="package" version="1.16.0">bioconductor-qfeatures</requirement>
-        <requirement type="package" version="3.62.1">bioconductor-limma</requirement>
-        <requirement type="package" version="3.5.1">r-ggplot2</requirement>
+        <requirement type="package" version="3.58.0">bioconductor-sva</requirement>
+        <requirement type="package" version="1.84.0">bioconductor-impute</requirement>
+        <requirement type="package" version="1.38.0">bioconductor-scater</requirement>
+        <requirement type="package" version="1.20.0">bioconductor-qfeatures</requirement>
+        <requirement type="package" version="3.66.0">bioconductor-limma</requirement>
+        <requirement type="package" version="4.0.3">r-ggplot2</requirement>
     </requirements>
     <required_files>
         <include path="utils.r" />
diff --git a/tools/bioconductor-scp/macros.xml b/tools/bioconductor-scp/macros.xml
index 8355a84a..4c5484b0 100644
--- a/tools/bioconductor-scp/macros.xml
+++ b/tools/bioconductor-scp/macros.xml
@@ -1,5 +1,5 @@
 <macros>
-    <token name="@TOOL_VERSION@">1.16.0</token>
+    <token name="@TOOL_VERSION@">1.20.0</token>
     <xml name="creator">
         <creator>
             <person