set circleci #2
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| on: | |
| push: | |
| name: R-release | |
| jobs: | |
| metadata: | |
| name: Read package metadata | |
| runs-on: ubuntu-latest | |
| outputs: | |
| version: ${{ steps.meta.outputs.version }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.5.2' | |
| - name: Extract version from DESCRIPTION | |
| id: meta | |
| run: | | |
| VERSION="$(Rscript -e 'x <- read.dcf("DESCRIPTION"); cat(x[1,"Version"])')" | |
| echo "version=$VERSION" >> "$GITHUB_OUTPUT" | |
| echo "Detected version: $VERSION" | |
| build: | |
| name: Build R package on ${{ matrix.config.os }} | |
| runs-on: ${{ matrix.config.os }} | |
| needs: metadata | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| _R_CHECK_TESTS_NLINES_: 0 | |
| NOT_CRAN: true | |
| HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK: true | |
| _R_CHECK_FORCE_SUGGESTS_: false | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_LIBS: ${{ github.workspace }}/Rlibs | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| # - {os: macos-15-intel, r: 'release', build: 'binary'} | |
| - {os: windows-latest, r: 'release', build: 'binary'} | |
| - {os: ubuntu-latest, r: 'release', build: 'source'} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v4 | |
| - name: Setup pandoc | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - name: Configuration Information | |
| if: runner.os == 'Linux' || runner.os == 'macOS' | |
| run: | | |
| mkdir ${R_LIBS} | |
| c++ --version | |
| cmake --version | |
| which R | |
| R --version | |
| - name: Install R packages | |
| if: runner.os == 'Linux' || runner.os == 'macOS' | |
| run: | | |
| R -e "install.packages(c('remotes', 'desc'), lib=c('${R_LIBS}'), repo='https://cloud.r-project.org/')" | |
| - name: Make source (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| set -x | |
| R CMD build . --no-manual | |
| env: | |
| ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS: 2 | |
| - name: Build Package (macOS) | |
| if: runner.os == 'macOS' | |
| run: | | |
| set -x | |
| R CMD INSTALL --build -l ${R_LIBS} --configure-vars='MAKEJ=8' . | |
| env: | |
| ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS: 2 | |
| - name: Configuration Information (Windows) | |
| if: startsWith(matrix.config.os, 'windows') | |
| shell: pwsh | |
| run: | | |
| New-Item -ItemType Directory -Force -Path "$env:R_LIBS" | Out-Null | |
| g++ --version | |
| cmake --version | |
| Get-Command R.exe | |
| R.exe --version | |
| - name: Install R packages (Windows) | |
| if: startsWith(matrix.config.os, 'windows') | |
| shell: pwsh | |
| run: | | |
| Rscript -e "lib <- Sys.getenv('R_LIBS'); lib <- normalizePath(lib, winslash='/', mustWork=FALSE); dir.create(lib, recursive=TRUE, showWarnings=FALSE); install.packages('remotes', lib=lib, repos='https://cloud.r-project.org/')" | |
| Rscript.exe -e "install.packages(c('remotes', 'desc'), repos='https://cloud.r-project.org/')" | |
| - name: Build Package (Windows) | |
| if: startsWith(matrix.config.os, 'windows') | |
| shell: pwsh | |
| env: | |
| ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS: 2 | |
| run: | | |
| $env:MAKEJ="8" | |
| $env:ADDITIONAL_SITK_MODULES="-DSimpleITK_USE_ELASTIX=ON" | |
| Rcmd.exe INSTALL --build . | |
| - name: Collect artifacts | |
| shell: bash | |
| run: | | |
| mkdir -p dist | |
| mv *.zip *.tgz *.tar.gz dist/ 2>/dev/null || true | |
| - name: Upload artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: r-${{ matrix.config.os }} | |
| path: dist/* | |
| release: | |
| name: Create GitHub Release | |
| runs-on: ubuntu-22.04 | |
| needs: [metadata, build] | |
| permissions: | |
| contents: write | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| path: dist | |
| - name: Inspect release assets | |
| run: ls -R dist | |
| - name: Publish release | |
| uses: softprops/action-gh-release@v2 | |
| with: | |
| tag_name: ${{ needs.metadata.outputs.version }} | |
| name: ${{ needs.metadata.outputs.version }} | |
| draft: true | |
| files: dist/**/* |